| Protein ZmCA5P3 | |
|---|---|
|
ZmCA5P3 is a protein in the CCAAT-HAP5 family.
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| Information | |
| TF Name: | ZmCA5P3 |
| Species: | Maize |
| TF Family: | CCAAT-HAP5 |
| Gene Name(Synonym): | CA5P3 |
| Uniprot ID: | A0A1D6PDQ1 |
| Subgenome: | 2 |
Protein ZmCA5P3
ZmCA5P3 is a protein in the CCAAT-HAP5 family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.
| Overview of domains present in v5 transcripts | ||||
|---|---|---|---|---|
| NF-YB | NF-YC | PF00125 | PF00808 | |
| Zm00001eb274340_T002 |  | | | |
| Zm00001eb274340_T001 | | | | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d036648 | DAPseq |  |
sequence | fimo | position |
| Zm00001d036648 | DAPseq |  |
sequence | fimo | position |
| Zm00001d036648 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d036648 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmCA5P3 is the regulator
Interactions where ZmCA5P3 is the target
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Zm00001eb274340_T002 from maize genome v5
Amino Acid Sequence
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MEPSSQPQPAMGVAAGGSQVYPASAYPPAATVAPPAVASAGLQSVQPFPANPAHMSAQHQIVYQQAQQFHQQLQQQQQQQ
LQQFWVERMTEIEATADFRNHNLPLARIKKIMKADEDVRMISAEAPVVFAKACEIFILELTLRSWMHTEENKRRTLQKND
IAAAITRTDIYDFLVDIVPRDEMKDDGIGLPRPGLPPMGAPADAYPYYYMPQQQVPGPGMVYGAQQGHPVTYLWQDPQEQ
QEQAPEEQQSLHERD
MEPSSQPQPAMGVAAGGSQVYPASAYPPAATVAPPAVASAGLQSVQPFPANPAHMSAQHQIVYQQAQQFHQQLQQQQQQQ
LQQFWVERMTEIEATADFRNHNLPLARIKKIMKADEDVRMISAEAPVVFAKACEIFILELTLRSWMHTEENKRRTLQKND
IAAAITRTDIYDFLVDIVPRDEMKDDGIGLPRPGLPPMGAPADAYPYYYMPQQQVPGPGMVYGAQQGHPVTYLWQDPQEQ
QEQAPEEQQSLHERD
MEPSSQPQPAMGVAAGGSQVYPASAYPPAATVAPPAVASAGLQSVQPFPANPAHMSAQHQIVYQQAQQFHQQLQQQQQQQ
LQQFWVERMTEIEATADFRNHNLPLARIKKIMKADEDVRMISAEAPVVFAKACEIFILELTLRSWMHTEENKRRTLQKND
IAAAITRTDIYDFLVDIVPRDEMKDDGIGLPRPGLPPMGAPADAYPYYYMPQQQVPGPGMVYGAQQGHPVTYLWQDPQEQ
QEQAPEEQQSLHERD
MEPSSQPQPAMGVAAGGSQVYPASAYPPAATVAPPAVASAGLQSVQPFPANPAHMSAQHQIVYQQAQQFHQQLQQQQQQQ
LQQFWVERMTEIEATADFRNHNLPLARIKKIMKADEDVRMISAEAPVVFAKACEIFILELTLRSWMHTEENKRRTLQKND
IAAAITRTDIYDFLVDIVPRDEMKDDGIGLPRPGLPPMGAPADAYPYYYMPQQQVPGPGMVYGAQQGHPVTYLWQDPQEQ
QEQAPEEQQSLHERD
MEPSSQPQPAMGVAAGGSQVYPASAYPPAATVAPPAVASAGLQSVQPFPANPAHMSAQHQIVYQQAQQFHQQLQQQQQQQ
LQQFWVERMTEIEATADFRNHNLPLARIKKIMKADEDVRMISAEAPVVFAKACEIFILELTLRSWMHTEENKRRTLQKND
IAAAITRTDIYDFLVDIVPRDEMKDDGIGLPRPGLPPMGAPADAYPYYYMPQQQVPGPGMVYGAQQGHPVTYLWQDPQEQ
QEQAPEEQQSLHERD
MEPSSQPQPAMGVAAGGSQVYPASAYPPAATVAPPAVASAGLQSVQPFPANPAHMSAQHQIVYQQAQQFHQQLQQQQQQQ
LQQFWVERMTEIEATADFRNHNLPLARIKKIMKADEDVRMISAEAPVVFAKACEIFILELTLRSWMHTEENKRRTLQKND
IAAAITRTDIYDFLVDIVPRDEMKDDGIGLPRPGLPPMGAPADAYPYYYMPQQQVPGPGMVYGAQQGHPVTYLWQDPQEQ
QEQAPEEQQSLHERD
MEPSSQPQPAMGVAAGGSQVYPASAYPPAATVAPPAVASAGLQSVQPFPANPAHMSAQHQIVYQQAQQFHQQLQQQQQQQ
LQQFWVERMTEIEATADFRNHNLPLARIKKIMKADEDVRMISAEAPVVFAKACEIFILELTLRSWMHTEENKRRTLQKND
IAAAITRTDIYDFLVDIVPRDEMKDDGIGLPRPGLPPMGAPADAYPYYYMPQQQVPGPGMVYGAQQGHPVTYLWQDPQEQ
QEQAPEEQQSLHERD
MEPSSQPQPAMGVAAGGSQVYPASAYPPAATVAPPAVASAGLQSVQPFPANPAHMSAQHQIVYQQAQQFHQQLQQQQQQQ
LQQFWVERMTEIEATADFRNHNLPLARIKKIMKADEDVRMISAEAPVVFAKACEIFILELTLRSWMHTEENKRRTLQKND
IAAAITRTDIYDFLVDIVPRDEMKDDGIGLPRPGLPPMGAPADAYPYYYMPQQQVPGPGMVYGAQQGHPVTYLWQDPQEQ
QEQAPEEQQSLHERD
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00125 |
|
| PF00808 |
|
| NF-YB |
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| NF-YC |
|
| Hover here to show all domains | |
Nucleotide Sequence
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AGGAGGGGACTAGGGGAGAGAGAGA...
AGGAGGGGACTAGGGGAGAGAGAGAGGGGGAAGGCCAAGAAGAGGCTTCCTCTCCCCCCATTCTCCAATCCGTGCCCTAGTCGAGCCAGCCGCGAGGAAGGAGGCGTCTCGCCTAGCGCCCGCCCGTCGGCCGACCTTCTGCTGCACCTTCGAAGTTGTCATGGGAAAATGCCAAATGGATGACGACCTTGAAAGTTCGAAACCATGGATTGTCATTCTATTTTGTGACAAAAGAGTTAATATGTTGCACCTATCCTTGGTGCACATATATTAAATGGCTATTCATTCCGGAATGGTGTAAAATGAGAAGGTGATTGCATAGCATTCACTGTTTGATGTATCAGTAGGACGTCATCGCACAGCCGTACTCTTCCTGTTGGTATATATATGCCCATTCACTACATGACACTTGTGCAAATAAAGAAACACATGATACTTGTGGCGAGTGAAAAGATAAGTTCTCCAGTGGAACAAGAAGGTGACTGCGTAGAATTCACTGCTTGCTGTATTAGTAGCACATCATCCTTATCCAATAGTCATATCCTTCTGGAGGACATAATGGTATATATCGTGCAAATCAATAAAATACATGATACTTGTGGAAGTTGAAAAGATAAGTTCTCCAGTGGAGTTGGTTTTGCATAGCTCTGGAAAGATCATAGATTTTTGGGCAATAGCAAGTGGACATGGAACCATCCTCTCAGCCTCAGCCTGCGATGGGTGTCGCCGCCGGTGGGTCACAAGTGTATCCTGCGTCTGCCTACCCGCCTGCAGCAACAGTAGCTCCTCCTGCTGTTGCATCTGCTGGTTTACAGTCAGTGCAACCATTCCCAGCCAACCCTGCCCATATGAGTGCTCAGCACCAGATTGTCTACCAACAAGCTCAACAGTTCCACCAACAGCTCCAGCAGCAGCAACAGCAGCAGCTTCAGCAGTTCTGGGTCGAACGCATGACTGAAATCGAGGCAACAGCTGATTTCAGGAACCACAACTTGCCACTTGCGAGGATAAAGAAGATCATGAAGGCCGACGAAGATGTCCGCATGATCTCAGCCGAAGCTCCCGTGGTCTTCGCAAAAGCTTGCGAGATATTCATACTGGAGCTGACGCTGAGGTCGTGGATGCACACCGAGGAGAACAAGCGCCGCACCTTGCAGAAGAACGACATTGCCGCAGCCATCACCAGGACCGACATTTACGACTTCTTGGTCGACATTGTTCCCAGGGATGAGATGAAGGACGACGGAATCGGGCTTCCTAGGCCCGGGCTGCCACCCATGGGAGCCCCAGCTGACGCATATCCATACTACTACATGCCACAGCAGCAGGTGCCTGGTCCTGGGATGGTTTATGGCGCCCAGCAAGGCCACCCGGTGACGTATCTGTGGCAGGATCCTCAGGAACAGCAGGAGCAAGCTCCTGAAGAGCAGCAGTCTCTGCATGAAAGGGACTGAGGATGTCGCTCAAGCTATCACCTGATTTTTCAGAGCTCTCATTTTAGGTTCTCTAAACTGCAGGTTTTCGTTGGCTAATATCGTTGGGTATCAAACTGAAACAGGTAGGGTGTAGCATCATGGTAGTTTGATTTCTGCTGTGGTGTTAGTTGGAGGGATAATGATTAGCGGCTAGTGGATTAAAGTTACCCATACCGTTTCCTTTCGTTCCAAAAGTTCGCCTTCATGAGGCCTCTGATATGAAAAATGCTGGGTGTTAATGCTTCTATGCTCTGCTTGTGTTGTGCAGTTCATGCTTCTC
GRMZM2G161680_T01 from maize genome v3
Amino Acid Sequence
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MEPSSQPQPAMGVAAGGSQVYPASAYPPAATVAPPAVASAGLQSVQPFPANPAHMSAQHQIVYQQAQQFHQQLQQQQQQQ
LQQFWVERMTEIEATADFRNHNLPLARIKKIMKADEDVRMISAEAPVVFAKACEIFILELTLRSWMHTEENKRRTLQKND
IAAAITRTDIYDFLVDIVPRDEMKDDGIGLPRPGLPPMGAPADAYPYYYMPQQQVPGPGMVYGAQQGHPVTYLWQDPQEQ
QEQAPEEQQSLHERD
Nucleotide Sequence
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CACGCTTTCGCTCCGAGGAGAATTT...
CACGCTTTCGCTCCGAGGAGAATTTAAGAACCGAGTAGGCAGACAGGGAAGGCTAGGAGGGGACTAGGGGAGAGAGAGAGGGGGAAGGCCAAGAAGAGGCTTCCTCTCCCCCCATTCTCCAATCCGTGCCCTAGTCGAGCCAGCCGCGAGGAAGGAGGCGTCTCGCCTAGCGCCCGCCCGTCGGCCGACCTTCTGCTGCACCTTCGAACTCTGGAAAGATCATAGATTTTTGGGCAATAGCAAGTGGACATGGAACCATCCTCTCAGCCTCAGCCTGCGATGGGTGTCGCCGCCGGTGGGTCACAAGTGTATCCTGCGTCTGCCTACCCGCCTGCAGCAACAGTAGCTCCTCCTGCTGTTGCATCTGCTGGTTTACAGTCAGTGCAACCATTCCCAGCCAACCCTGCCCATATGAGTGCTCAGCACCAGATTGTCTACCAACAAGCTCAACAGTTCCACCAACAGCTCCAGCAGCAGCAACAGCAGCAGCTTCAGCAGTTCTGGGTCGAACGCATGACTGAAATCGAGGCAACAGCTGATTTCAGGAACCACAACTTGCCACTTGCGAGGATAAAGAAGATCATGAAGGCCGACGAAGATGTCCGCATGATCTCAGCCGAAGCTCCCGTGGTCTTCGCAAAAGCTTGCGAGATATTCATACTGGAGCTGACGCTGAGGTCGTGGATGCACACCGAGGAGAACAAGCGCCGCACCTTGCAGAAGAACGACATTGCCGCAGCCATCACCAGGACCGACATTTACGACTTCTTGGTCGACATTGTTCCCAGGGATGAGATGAAGGACGACGGAATCGGGCTTCCTAGGCCCGGGCTGCCACCCATGGGAGCCCCAGCTGACGCATATCCATACTACTACATGCCACAGCAGCAGGTGCCTGGTCCTGGGATGGTTTATGGCGCCCAGCAAGGCCACCCGGTGACGTATCTGTGGCAGGATCCTCAGGAACAGCAGGAGCAAGCTCCTGAAGAGCAGCAGTCTCTGCATGAAAGGGACTGAGGATGTCGCTCAAGCTATCACCTGATTTTTCAGAGCTCTCATTTTAGGTTCTCTAAACTGCAGGTTTTCGTTGGCTAATATCGTTGGGTATCAAACTGAAACAGGTAGGGTGTAGCATCATGGTAGTTTGATTTCTGCTGTGGTGTTAGTTGGAGGGATAATGATTAGCGGCTAGTGGATTAAAGTTACCCATACCGTTTCCTTTCGTTCCAAAAGTTCGCCTTCATGAGGCCTCTGATATGAAAAATGCTGGGTGTTAATGCTTCTATGCTCTGCTTGTGTTGTGCAGTTCATGCTTCTC
Zm00001d036648_T001 from maize genome v4
Amino Acid Sequence
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MGVAAGGSQVYPASAYPPAATVAPPAVASAGLQSVQPFPANPAHMSAQHQIVYQQAQQFHQQLQQQQQQQLQQFWVERMT
EIEATADFRNHNLPLARIKKIMKADEDVRMISAEAPVVFAKACEIFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDI
YDFLVDIVPRDEMKDDGIGLPRPGLPPMGAPADAYPYYYMPQQQVPGPGMVYGAQQGHPVTYLWQDPQEQQEQAPEEQQS
LHERD
Nucleotide Sequence
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ATGGGTGTCGCCGCCGGTGGGTCAC...
ATGGGTGTCGCCGCCGGTGGGTCACAAGTGTATCCTGCGTCTGCCTACCCGCCTGCAGCAACAGTAGCTCCTCCTGCTGTTGCATCTGCTGGTTTACAGTCAGTGCAACCATTCCCAGCCAACCCTGCCCATATGAGTGCTCAGCACCAGATTGTCTACCAACAAGCTCAACAGTTCCACCAACAGCTCCAGCAGCAGCAACAGCAGCAGCTTCAGCAGTTCTGGGTCGAACGCATGACTGAAATCGAGGCAACAGCTGATTTCAGGAACCACAACTTGCCACTTGCGAGGATAAAGAAGATCATGAAGGCCGACGAAGATGTCCGCATGATCTCAGCCGAAGCTCCCGTGGTCTTCGCAAAAGCTTGCGAGATATTCATACTGGAGCTGACGCTGAGGTCGTGGATGCACACCGAGGAGAACAAGCGCCGCACCTTGCAGAAGAACGACATTGCCGCAGCCATCACCAGGACCGACATTTACGACTTCTTGGTCGACATTGTTCCCAGGGATGAGATGAAGGACGACGGAATCGGGCTTCCTAGGCCCGGGCTGCCACCCATGGGAGCCCCAGCTGACGCATATCCATACTACTACATGCCACAGCAGCAGGTGCCTGGTCCTGGGATGGTTTATGGCGCCCAGCAAGGCCACCCGGTGACGTATCTGTGGCAGGATCCTCAGGAACAGCAGGAGCAAGCTCCTGAAGAGCAGCAGTCTCTGCATGAAAGGGACTGA
Zm00001eb274340_T001 from maize genome v5
Amino Acid Sequence
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MEPSSQPQPAMGVAAGGSQVYPASAYPPAATVAPPAVASAGLQSVQPFPANPAHMSAQHQIVYQQAQQFHQQLQQQQQQQ
LQQFWVERMTEIEATADFRNHNLPLARIKKIMKADEDVRMISAEAPVVFAKACEIFILELTLRSWMHTEENKRRTLQKND
IAAAITRTDIYDFLVDIVPRDEMKDDGIGLPRPGLPPMGAPADAYPYYYMPQQQVPGPGMVYGAQQGHPVTYLWQDPQEQ
QEQAPEEQQSLHERD
Nucleotide Sequence
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GTCATTTGCACAACCACGGTCCGTT...
GTCATTTGCACAACCACGGTCCGTTTCCATGGCGACCCGCTCTCTGCCACCGACGCCCGGGCCCGCGGCCCAAACACCACCTGGACGGCTTGGGCCCCAGTACGGACCGGATTGAGGCCTGGCCTGGACCCGGAAGCACCAGGTGGTGCTGCCAATGGGACGCACGCTTTCGCTCCGAGGAGAATTTAAGAACCGAGTAGGCAGACAGGGAAGGCTAGGAGGGGACTAGGGGAGAGAGAGAGGGGGAAGGCCAAGAAGAGGCTTCCTCTCCCCCCATTCTCCAATCCGTGCCCTAGTCGAGCCAGCCGCGAGGAAGGAGGCGTCTCGCCTAGCGCCCGCCCGTCGGCCGACCTTCTGCTGCACCTTCGAACTCTGGAAAGATCATAGATTTTTGGGCAATAGCAAGTGGACATGGAACCATCCTCTCAGCCTCAGCCTGCGATGGGTGTCGCCGCCGGTGGGTCACAAGTGTATCCTGCGTCTGCCTACCCGCCTGCAGCAACAGTAGCTCCTCCTGCTGTTGCATCTGCTGGTTTACAGTCAGTGCAACCATTCCCAGCCAACCCTGCCCATATGAGTGCTCAGCACCAGATTGTCTACCAACAAGCTCAACAGTTCCACCAACAGCTCCAGCAGCAGCAACAGCAGCAGCTTCAGCAGTTCTGGGTCGAACGCATGACTGAAATCGAGGCAACAGCTGATTTCAGGAACCACAACTTGCCACTTGCGAGGATAAAGAAGATCATGAAGGCCGACGAAGATGTCCGCATGATCTCAGCCGAAGCTCCCGTGGTCTTCGCAAAAGCTTGCGAGATATTCATACTGGAGCTGACGCTGAGGTCGTGGATGCACACCGAGGAGAACAAGCGCCGCACCTTGCAGAAGAACGACATTGCCGCAGCCATCACCAGGACCGACATTTACGACTTCTTGGTCGACATTGTTCCCAGGGATGAGATGAAGGACGACGGAATCGGGCTTCCTAGGCCCGGGCTGCCACCCATGGGAGCCCCAGCTGACGCATATCCATACTACTACATGCCACAGCAGCAGGTGCCTGGTCCTGGGATGGTTTATGGCGCCCAGCAAGGCCACCCGGTGACGTATCTGTGGCAGGATCCTCAGGAACAGCAGGAGCAAGCTCCTGAAGAGCAGCAGTCTCTGCATGAAAGGGACTGAGGATGTCGCTCAAGCTATCACCTGATTTTTCAGAGCTCTCATTTTAGGTTCTCTAAACTGCAGGTTTTCGTTGGCTAATATCGTTGGGTATCAAACTGAAACAGGTAGGGTGTAGCATCATGGTAGTTTGATTTCTGCTGTGGTGTTAGTTGGAGGGATAATGATTAGCGGCTAGTGGATTAAAGTTACCCATACCGTTTCCTTTCGTTCCAAAAGTTCGCCTTCATGAGGCCTCTGATATGAAAAATGCTGGGTGTTAATGCTTCTATGCTCTGCTTGTGTTGTGCAGTTCATGCTTCTCTCTTTTCTCCATTGCTCTTGATTCGTAGCGTGGAAGGTGTTCTGTTAATTCATGGAAATTCTGTTCCAGACTTGTGT
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